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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869499.1_cds_XP_016433777.1_29901
CDS Infomation

[gene=LOC107760263] [db_xref=GeneID:107760263] [protein=sodium/hydrogen exchanger 1-like isoform X2] [protein_id=XP_016433777.1] [location=join(67161..67334,67862..67980,68915..69012,69936..69995,70090..70136,70212..70406,70534..70580,70806..70872,70958..71058,71387..71488,71612..71750,71826..71888,72017..72100,72223..72537)] [gbkey=CDS]
Sequence

ATGGCGTCTGAGCTGGCTTCTATGTTTCCAAAACTGGGCTCTCTTGGTACTTCAGATCAT
GGTTCTGTTGTATCCATCAACCTCTTTGTGGCACTCCTTTGCGCTTGCATTGTCATTGGT
CATCTGCTGGAGGAGAACCGCTGGATAAATGAATCCATTACCGCCCTCATAATTGGCTTG
GGTGTAGGAGTTGTTATCTTGCTCATAAGTGGGGGAAAGAGCTCACATCTTCTGGTCTTC
AGTGAAGATCTCTTTTTCATATATCTACTTCCTCCAATCATATTTAATGCAGGATTTCAG
GTAAAAAAGAAGCAATTTTTCGTAAACTTCATTACTATAATGCTGTTCGGAGCCATTGGT
ACACTGATCTCATGTGCCATTATATCATTAGGTGCCATTAAATTCTTCAAGAAGTTGGAC
ATTGGATTTCTAGATATTGGGGATTATGTCGCAATTGGAGCAATATTTGCTGCCACAGAC
TCCGTCTGCACGTTGCAGGTCCTACATCAGGATGAGACACCCCTCCTTTACAGTCTTGTA
TTTGGAGAAGGAGTTGTAAATGATGCTACATCGGTGGTGCTTTTCAATGCTATTCAAAAC
TTTGACCTTTCGAGTGTGAATCCCAGTATTGCCCTTCATTTCATTGGCAACTTCTTATAT
CTGTTCCTTGCTAGCACTTTACTGGGAGCAGCAACTGGTCTTCTTAGTGCTTACATTATC
AAGAAGCTGTATTTTGGCAGGCACTCCACAGATCGCGAGGTTGCACTTATGATGCTCATG
GCTTACTTATCATACATGTTGGCTGAACTATTCTATTTGAGTGGGATTCTCACTGTATTT
TTCTGTGGTATTGTAATGTCCCATTACACTTGGCACAATGTGACTGAGAGTTCAAGAGTC
ACTACAAGGTACGCTTTTGCAACTTTGTCATTTCTTGCTGAGACTTTCCTCTTCCTCTAT
GTCGGTATGGATGCCTTGGATATCGAGAAGTGGAAATTTGTTAGTGATAGTCCTGGATTA
TCTGTTGCAGTAAGTTCGATACTGATGGGACTAATCTTGCTGGGGAGAGCTGCCTTTGTT
TTTCCATTATCATTCTTATCCAACTTGATGAAGAAATCCTCTGAGGAAAAAATAACCTTT
AGGCAGCAAGTGATAATATGGTGGGCTGGTTTGATGAGAGGTGCAGTGTCCATGGCTCTG
GCATATAATAAGTTCACTCGTTTGGGACACACTCAATTGCAAGACAACGCAATAATGATT
ACCAGCACCATTACCATTGTTCTTTTCAGCACAGTGGTATTTGGTTTAATGACAAAACCT
CTTATAAGTCTCCTGTTGCCCCCACAGAGGCAGTTAAGTACAGTGTCATCAGATGCAAAT
AGTCCAAAATCTCTTACAGCTCCACTCCTAGGCAGTCAAGAGGGTTCTGAAGTCGATTTA
AATGGTCAAGAACTTCCGCACCCACCTAGTTTGAGGATGCTACTTTCCGCGCCAACCCAT
AAGGTGCATAGATACTGGCGCAAGTTTGATGATTCATTCATGCGCCCAGTGTTTGGTGGT
CGGGGTTTTACACCTGTTGCCCCTGGTTCTCCAACGGAACAGGAACCATGA

Peptide Sequence

PEP ID

XP_016433777.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 1-like isoform X2 [Nicotiana tabacum]
Sequence

MASELASMFPKLGSLGTSDHGSVVSINLFVALLCACIVIGHLLEENRWINESITALIIGL
GVGVVILLISGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIG
TLISCAIISLGAIKFFKKLDIGFLDIGDYVAIGAIFAATDSVCTLQVLHQDETPLLYSLV
FGEGVVNDATSVVLFNAIQNFDLSSVNPSIALHFIGNFLYLFLASTLLGAATGLLSAYII
KKLYFGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRV
TTRYAFATLSFLAETFLFLYVGMDALDIEKWKFVSDSPGLSVAVSSILMGLILLGRAAFV
FPLSFLSNLMKKSSEEKITFRQQVIIWWAGLMRGAVSMALAYNKFTRLGHTQLQDNAIMI
TSTITIVLFSTVVFGLMTKPLISLLLPPQRQLSTVSSDANSPKSLTAPLLGSQEGSEVDL
NGQELPHPPSLRMLLSAPTHKVHRYWRKFDDSFMRPVFGGRGFTPVAPGSPTEQEP

Transcript Sequence

Gene sequence data has not been registered.